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How to deploy a package with VS 2013 Update 4

I am having few problems when deploying an application project to IIS. It works normally when developing it and running with IISExpress.

I used the Web Deploy Package Publish Method and ran the .deploy.cmd file. It ended with the error "This Access Control List is not in canonical form and therefore cannot be modified". In the beginning IIS showed only the Virtual directory so I had to convert it in an application.

When running it I have now the error "Could not load file or assembly 'System.Web' or one of its dependencies. The system cannot find the file specified.
 I have found several posts on this error and tried the tips suggested without solving the problem. Then I went to the bin directory of the deployed app and actually there is no System.Web.HTTP.WebHost.dll in it, as it is suggested to be there on some posts.

What is there is almost exactly what is written on the file Packages.config of my webForm application in Visual Studio.

So I do not understand if all the references must be also in this Packages.config.

Can someone explain me (possibly with plain text) what I have to do in my project before building and deploy it on IIS? I am sure I am missing something new in VS 2013, because I used to do it in VS 2010 without any problem.

Thanks


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